Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm17535J3KMR8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm17535J3KMR8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Gm13823-201ENSMUST00000119930 345 ntBASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Gm27618-201ENSMUST00000183671 60 ntBASIC15.71■□□□□ 0.11
Gm17535J3KMR8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm17535J3KMR8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm17535J3KMR8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm17535J3KMR8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm17535J3KMR8 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.71■□□□□ 0.1
Gm17535J3KMR8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm17535J3KMR8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm17535J3KMR8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Gm38294-201ENSMUST00000192831 381 ntBASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.7■□□□□ 0.1
Gm17535J3KMR8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Gm17535J3KMR8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm17535J3KMR8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.69■□□□□ 0.1
Gm17535J3KMR8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms