Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Gm18115-201ENSMUST00000221209 621 ntBASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim55G3X8Y1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim55G3X8Y1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim55G3X8Y1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Gm43183-201ENSMUST00000200632 547 ntBASIC15.25■□□□□ 0.03
Trim55G3X8Y1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim55G3X8Y1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Mir5122-201ENSMUST00000175004 89 ntBASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim55G3X8Y1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms