Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 AC069561.1-201ENSMUST00000213750 424 ntBASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Gm43149-201ENSMUST00000198162 1422 ntBASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Nkx1-1G3UXB3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm15719-201ENSMUST00000120619 635 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm13461-201ENSMUST00000120980 662 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm17063-201ENSMUST00000168135 456 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm17794-201ENSMUST00000220252 955 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 AC156790.4-202ENSMUST00000228838 1418 ntBASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx1-1G3UXB3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Gm19214-201ENSMUST00000191956 1083 ntBASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-1G3UXB3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-1G3UXB3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms