Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.73■□□□□ 0.43
Ube4aE9Q735 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ube4aE9Q735 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Gm4875-201ENSMUST00000118257 786 ntBASIC17.72■□□□□ 0.43
Ube4aE9Q735 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Gm3436-201ENSMUST00000179930 840 ntBASIC17.72■□□□□ 0.43
Ube4aE9Q735 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ube4aE9Q735 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Ube4aE9Q735 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.71■□□□□ 0.43
Ube4aE9Q735 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.71■□□□□ 0.43
Ube4aE9Q735 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.71■□□□□ 0.43
Ube4aE9Q735 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ube4aE9Q735 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Ube4aE9Q735 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.71■□□□□ 0.42
Ube4aE9Q735 Asic1-205ENSMUST00000228185 1818 ntBASIC17.7■□□□□ 0.42
Ube4aE9Q735 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Ube4aE9Q735 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ube4aE9Q735 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms