Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Gm13015-201ENSMUST00000118674 204 ntBASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb9E9Q5G2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb9E9Q5G2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.39■□□□□ 0.38
Pcdhb9E9Q5G2 Carlr-201ENSMUST00000181515 2574 ntBASIC17.39■□□□□ 0.38
Pcdhb9E9Q5G2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb9E9Q5G2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb9E9Q5G2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb9E9Q5G2 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Gm24158-201ENSMUST00000175263 71 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb9E9Q5G2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb9E9Q5G2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms