Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hfm1D3Z4R1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 AC125117.1-201ENSMUST00000228121 468 ntBASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.49■□□□□ 0.87
Hfm1D3Z4R1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Gm15198-201ENSMUST00000117283 177 ntBASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hfm1D3Z4R1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Gm12882-201ENSMUST00000121696 517 ntBASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Gm17420-201ENSMUST00000164753 153 ntBASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hfm1D3Z4R1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Gm15957-201ENSMUST00000118893 974 ntBASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Gm27486-201ENSMUST00000184923 80 ntBASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Gm30437-201ENSMUST00000206086 1201 ntBASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Gm9257-201ENSMUST00000221254 232 ntBASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.46■□□□□ 0.87
Hfm1D3Z4R1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Hfm1D3Z4R1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms