Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Gm12350-201ENSMUST00000121208 462 ntBASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Mir5126-201ENSMUST00000175513 77 ntBASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim30cD3YVI9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Gm19164-201ENSMUST00000210667 640 ntBASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 AV026068-213ENSMUST00000223675 1171 ntBASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim30cD3YVI9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.21■□□□□ 0.19
Trim30cD3YVI9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim30cD3YVI9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim30cD3YVI9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim30cD3YVI9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Trim30cD3YVI9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim30cD3YVI9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms