Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm6912-201ENSMUST00000117218 544 ntBASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm6745-201ENSMUST00000199216 526 ntBASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clrn2B2RVW2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Gm42612-201ENSMUST00000197986 623 ntBASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Gm43170-201ENSMUST00000199827 612 ntBASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.09■□□□□ 0.33
Clrn2B2RVW2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clrn2B2RVW2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clrn2B2RVW2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Clrn2B2RVW2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn2B2RVW2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn2B2RVW2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clrn2B2RVW2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Gm15653-201ENSMUST00000119247 907 ntBASIC17.08■□□□□ 0.32
Clrn2B2RVW2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clrn2B2RVW2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Gm14042-201ENSMUST00000120139 833 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms