Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Dapk1-207ENSMUST00000226059 5009 ntBASIC11.9□□□□□ -0.5
Chd6A3KFM7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.9□□□□□ -0.5
Chd6A3KFM7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Gm18935-201ENSMUST00000212692 664 ntBASIC11.9□□□□□ -0.5
Chd6A3KFM7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Gm24644-201ENSMUST00000157114 139 ntBASIC11.9□□□□□ -0.5
Chd6A3KFM7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.9□□□□□ -0.5
Chd6A3KFM7 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.9□□□□□ -0.5
Chd6A3KFM7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd6A3KFM7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chd6A3KFM7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.9□□□□□ -0.51
Chd6A3KFM7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chd6A3KFM7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Chd6A3KFM7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gm12928-201ENSMUST00000117115 573 ntBASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gm6222-201ENSMUST00000120787 396 ntBASIC11.89□□□□□ -0.51
Chd6A3KFM7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gm14130-201ENSMUST00000118417 987 ntBASIC11.89□□□□□ -0.51
Chd6A3KFM7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gm17376-201ENSMUST00000166016 84 ntBASIC11.89□□□□□ -0.51
Chd6A3KFM7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.89□□□□□ -0.51
Chd6A3KFM7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd6A3KFM7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm43133-201ENSMUST00000197472 463 ntBASIC11.88□□□□□ -0.51
Chd6A3KFM7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm13813-201ENSMUST00000120998 787 ntBASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm43818-201ENSMUST00000200605 466 ntBASIC11.88□□□□□ -0.51
Chd6A3KFM7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd6A3KFM7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms