Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.48□□□□□ -0.57
Trav16A0A075B653 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.48□□□□□ -0.57
Trav16A0A075B653 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.47□□□□□ -0.57
Trav16A0A075B653 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.47□□□□□ -0.57
Trav16A0A075B653 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16A0A075B653 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Gm18032-201ENSMUST00000222541 538 ntBASIC11.46□□□□□ -0.57
Trav16A0A075B653 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.46□□□□□ -0.57
Trav16A0A075B653 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav16A0A075B653 Matn2-206ENSMUST00000228570 2798 ntBASIC11.46□□□□□ -0.58
Trav16A0A075B653 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.46□□□□□ -0.58
Trav16A0A075B653 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16A0A075B653 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms