Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav7-6A0A075B640 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gm7284-201ENSMUST00000131667 944 ntBASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gm27867-201ENSMUST00000184778 125 ntBASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Trav7-6A0A075B640 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Gm4459-201ENSMUST00000118750 468 ntBASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 Gm33142-201ENSMUST00000193913 867 ntBASIC10.43□□□□□ -0.74
Trav7-6A0A075B640 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms