Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Gm11950-201ENSMUST00000121615 838 ntBASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Gm5587-201ENSMUST00000206270 674 ntBASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.24□□□□□ -0.61
Trav16nA0A075B634 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16nA0A075B634 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Carlr-201ENSMUST00000181515 2574 ntBASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Gm6433-201ENSMUST00000118634 875 ntBASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.23□□□□□ -0.61
Trav16nA0A075B634 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16nA0A075B634 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16nA0A075B634 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms