Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav7n-4A0A075B620 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm8825-201ENSMUST00000182565 998 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm4518-201ENSMUST00000182638 718 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm19164-201ENSMUST00000210667 640 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.22□□□□□ -0.61
Trav7n-4A0A075B620 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav7n-4A0A075B620 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms