Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav4n-4A0A075B615 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav4n-4A0A075B615 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms