Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Gm12134-201ENSMUST00000122109 520 ntBASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn9Q9Z0S7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn9Q9Z0S7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn9Q9Z0S7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms