Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cx3cr1Q9Z0D9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cr1Q9Z0D9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cr1Q9Z0D9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cr1Q9Z0D9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cr1Q9Z0D9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cx3cr1Q9Z0D9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cx3cr1Q9Z0D9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm25745-201ENSMUST00000174945 133 ntBASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cr1Q9Z0D9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm15165-201ENSMUST00000118140 502 ntBASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm4459-201ENSMUST00000118750 468 ntBASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm43767-201ENSMUST00000198933 381 ntBASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm29518-201ENSMUST00000190858 372 ntBASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms