Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gm7730-201ENSMUST00000212486 454 ntBASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx6Q9R1R0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm22065-201ENSMUST00000103753 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm22066-201ENSMUST00000103761 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24932-201ENSMUST00000103763 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24115-201ENSMUST00000103799 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm22190-201ENSMUST00000103827 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm22191-201ENSMUST00000103831 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24721-201ENSMUST00000103849 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm28018-201ENSMUST00000103869 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm26399-201ENSMUST00000103937 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm25349-201ENSMUST00000177728 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm23616-201ENSMUST00000177797 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm25871-201ENSMUST00000177816 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24752-201ENSMUST00000178240 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24496-201ENSMUST00000178287 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm25649-201ENSMUST00000178476 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm25548-201ENSMUST00000178681 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm23147-201ENSMUST00000178841 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm26095-201ENSMUST00000179270 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm22171-201ENSMUST00000179283 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm23936-201ENSMUST00000179354 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm22619-201ENSMUST00000179516 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm25255-201ENSMUST00000179579 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24755-201ENSMUST00000179691 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm26506-201ENSMUST00000179692 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm25086-201ENSMUST00000179931 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm23243-201ENSMUST00000180047 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24659-201ENSMUST00000180212 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm24169-201ENSMUST00000180244 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm23689-201ENSMUST00000180354 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm27359-201ENSMUST00000184153 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm27785-201ENSMUST00000184268 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm27466-201ENSMUST00000184396 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm27703-201ENSMUST00000184836 110 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm6312-201ENSMUST00000204060 1194 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 AC131743.3-201ENSMUST00000222099 662 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 AC154634.2-201ENSMUST00000225983 1184 ntBASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lhx6Q9R1R0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms