Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Gm15693-201ENSMUST00000120470 637 ntBASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col13a1Q9R1N9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col13a1Q9R1N9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col13a1Q9R1N9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col13a1Q9R1N9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col13a1Q9R1N9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Gm15653-201ENSMUST00000119247 907 ntBASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Gm10154-201ENSMUST00000084445 354 ntBASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col13a1Q9R1N9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms