Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trex2Q9R1A9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Gm14722-201ENSMUST00000118943 689 ntBASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Gm37153-201ENSMUST00000193637 231 ntBASIC12.53□□□□□ -0.4
Trex2Q9R1A9 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trex2Q9R1A9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trex2Q9R1A9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Mir5131-201ENSMUST00000175426 93 ntBASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trex2Q9R1A9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trex2Q9R1A9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms