Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gm23547-201ENSMUST00000158210 271 ntBASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfwd2Q9R1A8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfwd2Q9R1A8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfwd2Q9R1A8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfwd2Q9R1A8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms