Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Gm1401-201ENSMUST00000122048 772 ntBASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Gm15590-201ENSMUST00000078419 552 ntBASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Clcn2Q9R0A1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Gm27628-201ENSMUST00000184911 107 ntBASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn2Q9R0A1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Gm12008-201ENSMUST00000117791 755 ntBASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn2Q9R0A1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms