Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Gm13223-201ENSMUST00000118609 747 ntBASIC13.11□□□□□ -0.31
Nubp1Q9R060 Gm16198-201ENSMUST00000118766 670 ntBASIC13.11□□□□□ -0.31
Nubp1Q9R060 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Gm7730-201ENSMUST00000212486 454 ntBASIC13.11□□□□□ -0.31
Nubp1Q9R060 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 CT009713.1-201ENSMUST00000224828 853 ntBASIC13.11□□□□□ -0.31
Nubp1Q9R060 Prl7a1-203ENSMUST00000224852 1283 ntBASIC13.11□□□□□ -0.31
Nubp1Q9R060 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.11□□□□□ -0.31
Nubp1Q9R060 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Nubp1Q9R060 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm25509-201ENSMUST00000116985 106 ntBASIC13.1□□□□□ -0.31
Nubp1Q9R060 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm11543-201ENSMUST00000120758 370 ntBASIC13.1□□□□□ -0.31
Nubp1Q9R060 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm27618-201ENSMUST00000183671 60 ntBASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nubp1Q9R060 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.09□□□□□ -0.31
Nubp1Q9R060 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Gm9385-201ENSMUST00000117563 472 ntBASIC13.09□□□□□ -0.31
Nubp1Q9R060 Gm6415-201ENSMUST00000118488 348 ntBASIC13.09□□□□□ -0.31
Nubp1Q9R060 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nubp1Q9R060 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nubp1Q9R060 Gm22993-201ENSMUST00000175423 254 ntBASIC13.09□□□□□ -0.31
Nubp1Q9R060 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms