Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps29Q9QZ88 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps29Q9QZ88 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Gm12134-201ENSMUST00000122109 520 ntBASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Mir5126-201ENSMUST00000175513 77 ntBASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps29Q9QZ88 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Gm27628-201ENSMUST00000184911 107 ntBASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps29Q9QZ88 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps29Q9QZ88 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm27300-201ENSMUST00000184085 97 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Gm27335-201ENSMUST00000184758 97 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms