Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phtf1Q9QZ09 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phtf1Q9QZ09 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phtf1Q9QZ09 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phtf1Q9QZ09 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Gm5867-201ENSMUST00000063197 592 ntBASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.3■□□□□ 0.2
Phtf1Q9QZ09 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Gm13464-201ENSMUST00000119418 935 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Mir1895-201ENSMUST00000122615 79 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Gm18057-201ENSMUST00000208220 503 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phtf1Q9QZ09 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Gm8749-201ENSMUST00000117737 331 ntBASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phtf1Q9QZ09 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Gm18889-201ENSMUST00000174284 929 ntBASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Gm44335-201ENSMUST00000196879 141 ntBASIC16.27■□□□□ 0.2
Phtf1Q9QZ09 Gm44297-201ENSMUST00000198304 141 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms