Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a2Q9JLR1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm7787-201ENSMUST00000216858 688 ntBASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a2Q9JLR1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gm9682-201ENSMUST00000197505 556 ntBASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gm18206-201ENSMUST00000207027 926 ntBASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a2Q9JLR1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Gm1401-201ENSMUST00000122048 772 ntBASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Gm27525-201ENSMUST00000184465 107 ntBASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61a2Q9JLR1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms