Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk3aQ9JKX8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Upk3aQ9JKX8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk3aQ9JKX8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gm27920-201ENSMUST00000183953 96 ntBASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk3aQ9JKX8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm11745-201ENSMUST00000121669 448 ntBASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm5479-201ENSMUST00000160578 435 ntBASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm24513-201ENSMUST00000174964 138 ntBASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm27494-201ENSMUST00000184735 189 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms