Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rhox4bQ9JI43 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Mir1668-201ENSMUST00000184114 107 ntBASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rhox4bQ9JI43 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.01□□□□□ -0.49
Rhox4bQ9JI43 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Gm12500-202ENSMUST00000186471 2428 ntBASIC12□□□□□ -0.49
Rhox4bQ9JI43 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rhox4bQ9JI43 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms