Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ube3bQ9ES34 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.61■□□□□ 0.41
Ube3bQ9ES34 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Gm27430-201ENSMUST00000184585 107 ntBASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Gm44333-201ENSMUST00000197168 107 ntBASIC17.61■□□□□ 0.41
Ube3bQ9ES34 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube3bQ9ES34 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube3bQ9ES34 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Gm6415-201ENSMUST00000118488 348 ntBASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Gm18766-201ENSMUST00000189811 808 ntBASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Gm37230-201ENSMUST00000194491 818 ntBASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Gm9182-201ENSMUST00000217829 639 ntBASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube3bQ9ES34 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube3bQ9ES34 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ube3bQ9ES34 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ube3bQ9ES34 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube3bQ9ES34 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ube3bQ9ES34 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms