Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm11355-201ENSMUST00000121120 306 ntBASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm18032-201ENSMUST00000222541 538 ntBASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Carlr-201ENSMUST00000181515 2574 ntBASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Acot6-202ENSMUST00000222921 3622 ntBASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.3□□□□□ -0.12
Ube4bQ9ES00 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Gm37722-201ENSMUST00000193757 208 ntBASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Gm7367-201ENSMUST00000057611 492 ntBASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4bQ9ES00 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms