Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4aQ9ER60 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4aQ9ER60 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4aQ9ER60 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn4aQ9ER60 Gm24255-201ENSMUST00000104481 128 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm8213-201ENSMUST00000118191 441 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm8749-201ENSMUST00000117737 331 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gm10702-201ENSMUST00000098929 1268 ntBASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Scn4aQ9ER60 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Gm6023-201ENSMUST00000118217 606 ntBASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn4aQ9ER60 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm11628-201ENSMUST00000117568 171 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm7029-201ENSMUST00000173226 450 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm20482-202ENSMUST00000174729 825 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm45186-201ENSMUST00000206874 478 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 AC154595.3-201ENSMUST00000224579 384 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm44397-201ENSMUST00000195950 113 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Gm43830-201ENSMUST00000198760 1067 ntBASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scn4aQ9ER60 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Gm6015-201ENSMUST00000217493 1586 ntBASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Gm24990-201ENSMUST00000157406 323 ntBASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn4aQ9ER60 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Gm12201-201ENSMUST00000120657 1234 ntBASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn4aQ9ER60 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms