Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Gm14494-201ENSMUST00000118786 435 ntBASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Celf4-206ENSMUST00000224553 1729 ntBASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Mir3113-201ENSMUST00000175478 76 ntBASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vps35Q9EQH3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Gm2272-201ENSMUST00000194903 582 ntBASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps35Q9EQH3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms