Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm6082-201ENSMUST00000215204 454 ntBASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Abhd11os-203ENSMUST00000222613 363 ntBASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.65■□□□□ 0.26
Upf1Q9EPU0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.64■□□□□ 0.26
Upf1Q9EPU0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
Upf1Q9EPU0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm25668-201ENSMUST00000157700 129 ntBASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm38158-201ENSMUST00000194617 339 ntBASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm43133-201ENSMUST00000197472 463 ntBASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.64■□□□□ 0.25
Upf1Q9EPU0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm11524-201ENSMUST00000119349 807 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm13464-201ENSMUST00000119418 935 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm11803-201ENSMUST00000119966 444 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm14381-201ENSMUST00000122105 414 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Gm43094-201ENSMUST00000196549 921 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upf1Q9EPU0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm1335-201ENSMUST00000121653 386 ntBASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm5523-201ENSMUST00000180415 997 ntBASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm6983-201ENSMUST00000214912 628 ntBASIC16.62■□□□□ 0.25
Upf1Q9EPU0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms