Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Cdc40Q9DC48 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Gm13597-201ENSMUST00000121239 375 ntBASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdc40Q9DC48 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Gm14701-201ENSMUST00000117156 348 ntBASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Chchd1-203ENSMUST00000224633 557 ntBASIC13.78□□□□□ -0.2
Cdc40Q9DC48 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdc40Q9DC48 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms