Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Gm23935-201ENSMUST00000102303 57 ntBASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Gm24270-201ENSMUST00000102326 57 ntBASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Gm24245-201ENSMUST00000157318 57 ntBASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssmem1Q9D9Y8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Rprl2-201ENSMUST00000157150 290 ntBASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Gm20553-201ENSMUST00000204205 844 ntBASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Chchd1-203ENSMUST00000224633 557 ntBASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssmem1Q9D9Y8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssmem1Q9D9Y8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms