Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcfc2Q9D968 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gm13312-201ENSMUST00000119631 718 ntBASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gm23547-201ENSMUST00000158210 271 ntBASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gm45328-201ENSMUST00000210942 917 ntBASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Matn2-206ENSMUST00000228570 2798 ntBASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hcfc2Q9D968 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gm5587-201ENSMUST00000206270 674 ntBASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Carlr-201ENSMUST00000181515 2574 ntBASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcfc2Q9D968 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hcfc2Q9D968 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc2Q9D968 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc2Q9D968 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms