Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndc80Q9D0F1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndc80Q9D0F1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ndc80Q9D0F1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Efs-202ENSMUST00000227037 2540 ntBASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ndc80Q9D0F1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.08■□□□□ 0
Ndc80Q9D0F1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.08■□□□□ 0
Ndc80Q9D0F1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms