Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm18489-201ENSMUST00000172565 551 ntBASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm44771-201ENSMUST00000206975 626 ntBASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shmt2Q9CZN7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shmt2Q9CZN7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Gm5682-201ENSMUST00000173402 505 ntBASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shmt2Q9CZN7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gm7787-201ENSMUST00000216858 688 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gm15590-201ENSMUST00000078419 552 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shmt2Q9CZN7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms