Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hdhd3Q9CYW4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Gm13312-201ENSMUST00000119631 718 ntBASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Gm9013-201ENSMUST00000132939 882 ntBASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Celf4-206ENSMUST00000224553 1729 ntBASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Acot6-202ENSMUST00000222921 3622 ntBASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hdhd3Q9CYW4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Gm11950-201ENSMUST00000121615 838 ntBASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hdhd3Q9CYW4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hdhd3Q9CYW4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hdhd3Q9CYW4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hdhd3Q9CYW4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hdhd3Q9CYW4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms