Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssu72Q9CY97 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssu72Q9CY97 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 AA414768-201ENSMUST00000121924 1257 ntBASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssu72Q9CY97 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ssu72Q9CY97 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.71□□□□□ -0.05
Ssu72Q9CY97 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssu72Q9CY97 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssu72Q9CY97 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms