Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gm5643-201ENSMUST00000117081 966 ntBASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gm8242-201ENSMUST00000193029 1420 ntBASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gm44430-201ENSMUST00000203376 995 ntBASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gm7213-201ENSMUST00000215977 950 ntBASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 CT009713.7-201ENSMUST00000224689 571 ntBASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rpl39lQ9CQD0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Spsb2-203ENSMUST00000112473 1322 ntBASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Matn2-206ENSMUST00000228570 2798 ntBASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC9.68□□□□□ -0.86
Rpl39lQ9CQD0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Gm37856-201ENSMUST00000191634 999 ntBASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms