Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prpf8Q99PV0 Gm13453-201ENSMUST00000118708 357 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Gm25144-201ENSMUST00000179561 110 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Gm25352-201ENSMUST00000179815 110 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Prpf8Q99PV0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Gm14127-201ENSMUST00000117906 678 ntBASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Gm12490-201ENSMUST00000120255 560 ntBASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Mir7684-201ENSMUST00000183858 60 ntBASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Prpf8Q99PV0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms