Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim33Q99PP7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.73□□□□□ -0.05
Trim33Q99PP7 BC037039-201ENSMUST00000192003 2205 ntBASIC14.73□□□□□ -0.05
Trim33Q99PP7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.73□□□□□ -0.05
Trim33Q99PP7 Gm13597-201ENSMUST00000121239 375 ntBASIC14.73□□□□□ -0.05
Trim33Q99PP7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim33Q99PP7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Gm9727-201ENSMUST00000161387 555 ntBASIC14.72□□□□□ -0.05
Trim33Q99PP7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms