Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim34aQ99PP6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim34aQ99PP6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim34aQ99PP6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim34aQ99PP6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim34aQ99PP6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim34aQ99PP6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm6222-201ENSMUST00000120787 396 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm2451-201ENSMUST00000199447 999 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm10290-201ENSMUST00000200451 999 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim34aQ99PP6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Gm15653-201ENSMUST00000119247 907 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Gm24694-201ENSMUST00000180054 110 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Gm27663-201ENSMUST00000184839 110 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Gm46209-201ENSMUST00000217912 553 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.22■□□□□ 0.51
Trim34aQ99PP6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Gm15321-201ENSMUST00000121290 288 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms