Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm13612-201ENSMUST00000119276 390 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Mir3102-201ENSMUST00000175555 104 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh15Q99PJ1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm18905-201ENSMUST00000205454 928 ntBASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Gm19184-201ENSMUST00000196798 928 ntBASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh15Q99PJ1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Gm15236-201ENSMUST00000117309 379 ntBASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Gm27847-201ENSMUST00000183711 107 ntBASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Gm27375-201ENSMUST00000183799 107 ntBASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh15Q99PJ1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms