Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdh23Q99PF4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Gm11814-201ENSMUST00000119515 929 ntBASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Gm37259-201ENSMUST00000193903 849 ntBASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdh23Q99PF4 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Gm3961-201ENSMUST00000204425 994 ntBASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdh23Q99PF4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Gm10012-201ENSMUST00000078252 192 ntBASIC14.88□□□□□ -0.03
Cdh23Q99PF4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Gm4857-201ENSMUST00000192718 785 ntBASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdh23Q99PF4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Gm27243-201ENSMUST00000183964 521 ntBASIC14.87□□□□□ -0.03
Cdh23Q99PF4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdh23Q99PF4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms