Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.9□□□□□ -0.18
Nkx6-1Q99MA9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx6-1Q99MA9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx6-1Q99MA9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Gm44719-201ENSMUST00000206404 149 ntBASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-1Q99MA9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-1Q99MA9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Gm15824-201ENSMUST00000119516 955 ntBASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Gm13829-201ENSMUST00000119600 138 ntBASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-1Q99MA9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms