Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Scrt1Q99M85 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.03□□□□□ -0.32
Scrt1Q99M85 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Scrt1Q99M85 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.03□□□□□ -0.32
Scrt1Q99M85 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scrt1Q99M85 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scrt1Q99M85 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scrt1Q99M85 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scrt1Q99M85 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scrt1Q99M85 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.02□□□□□ -0.32
Scrt1Q99M85 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scrt1Q99M85 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scrt1Q99M85 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.02□□□□□ -0.33
Scrt1Q99M85 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scrt1Q99M85 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.01□□□□□ -0.33
Scrt1Q99M85 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Gm6415-201ENSMUST00000118488 348 ntBASIC13.01□□□□□ -0.33
Scrt1Q99M85 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.01□□□□□ -0.33
Scrt1Q99M85 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms