Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm10499-201ENSMUST00000174094 934 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Mir5131-201ENSMUST00000175426 93 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm6443-201ENSMUST00000203599 874 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Gm18489-201ENSMUST00000172565 551 ntBASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp1b1Q99LU0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Gm9682-201ENSMUST00000197505 556 ntBASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 AV026068-213ENSMUST00000223675 1171 ntBASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp1b1Q99LU0 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms