Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm15321-201ENSMUST00000121290 288 ntBASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.84□□□□□ -0.03
Cstf1Q99LC2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.83□□□□□ -0.03
Cstf1Q99LC2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cstf1Q99LC2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cstf1Q99LC2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cstf1Q99LC2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cstf1Q99LC2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm8515-201ENSMUST00000194852 576 ntBASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cstf1Q99LC2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Gm24694-201ENSMUST00000180054 110 ntBASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Gm27663-201ENSMUST00000184839 110 ntBASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms