Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm15483-201ENSMUST00000120338 456 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm11543-201ENSMUST00000120758 370 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.33□□□□□ -0.12
Rab28Q99KL7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab28Q99KL7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.32□□□□□ -0.12
Rab28Q99KL7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab28Q99KL7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.31□□□□□ -0.12
Rab28Q99KL7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm8749-201ENSMUST00000117737 331 ntBASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm13365-201ENSMUST00000121188 973 ntBASIC14.31□□□□□ -0.12
Rab28Q99KL7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm18737-201ENSMUST00000173594 937 ntBASIC14.31□□□□□ -0.12
Rab28Q99KL7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab28Q99KL7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms